Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BIVM-ERCC5R4GMW8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 HLA-V-204ENST00000476601 1289 ntBASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 AC063926.2-201ENST00000623766 1308 ntBASIC28.14■■■□□ 2.1
BIVM-ERCC5R4GMW8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC027369.6-201ENST00000525520 931 ntBASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC008738.7-201ENST00000609744 511 ntBASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
BIVM-ERCC5R4GMW8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 GRAMD4P3-201ENST00000621665 1669 ntBASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 ZNF890P-202ENST00000530367 1156 ntBASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
BIVM-ERCC5R4GMW8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC244107.1-201ENST00000442033 332 ntBASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 KRT18P34-201ENST00000488218 1270 ntBASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 WASH4P-201ENST00000564273 1246 ntBASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
BIVM-ERCC5R4GMW8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 HNRNPA3P5-201ENST00000455201 833 ntBASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 AL132655.2-201ENST00000596276 594 ntBASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
BIVM-ERCC5R4GMW8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 AL133215.2-201ENST00000609242 977 ntBASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 AC073439.1-201ENST00000624121 1774 ntBASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC28.1■■■□□ 2.09
BIVM-ERCC5R4GMW8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms