Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 AC104581.1-202ENST00000635932 2618 ntBASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 AP005482.1-201ENST00000563722 1273 ntBASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARFGEF1Q9Y6D6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 CHCHD2P3-201ENST00000603038 451 ntBASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 AP000997.3-201ENST00000623333 2250 ntBASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARFGEF1Q9Y6D6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARFGEF1Q9Y6D6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 HLA-H-201ENST00000383620 1096 ntBASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 BCYRN1-201ENST00000418539 200 ntBASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 AL353705.2-201ENST00000428243 662 ntBASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 AC234783.1-201ENST00000441761 496 ntBASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 AC091167.2-201ENST00000579581 588 ntBASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 AC007541.1-201ENST00000570282 1469 ntBASIC20.64■□□□□ 0.89
ARFGEF1Q9Y6D6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 SPDYE18-201ENST00000510091 1050 ntBASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 AC135586.1-201ENST00000539323 574 ntBASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ARFGEF1Q9Y6D6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms