Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 AC093525.9-201ENST00000624961 1746 ntBASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 API5-211ENST00000534695 560 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42BPBQ9Y5S2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 HLA-H-201ENST00000383620 1096 ntBASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 NME2P1-201ENST00000426182 414 ntBASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 AC140912.1-201ENST00000577171 1054 ntBASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42BPBQ9Y5S2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 HLA-V-201ENST00000429037 534 ntBASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 HLA-V-204ENST00000476601 1289 ntBASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 AC027307.3-201ENST00000594262 1100 ntBASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 AL133215.2-201ENST00000609242 977 ntBASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.52■■□□□ 1.68
CDC42BPBQ9Y5S2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 SLC25A6P5-201ENST00000435663 894 ntBASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 RNA5-8SN1-201ENST00000610460 153 ntBASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 RNA5-8SN5-202ENST00000612463 153 ntBASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 AC003101.2-201ENST00000612557 442 ntBASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 RNA5-8SN4-201ENST00000613359 153 ntBASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 RNA5-8SN5-201ENST00000619471 153 ntBASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
CDC42BPBQ9Y5S2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 AC021097.1-201ENST00000607902 574 ntBASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42BPBQ9Y5S2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms