Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TUBB8P12-201ENST00000308911 1335 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TUBB7P-202ENST00000428444 1305 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 TUBB8P7-204ENST00000567960 1332 ntBASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHA3Q9Y5H8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AL020989.1-201ENST00000422979 469 ntBASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AC096582.2-201ENST00000510860 516 ntBASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AP002490.2-201ENST00000524791 560 ntBASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AL049597.2-201ENST00000565575 961 ntBASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 AP002414.4-201ENST00000589764 1148 ntBASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA3Q9Y5H8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 PCED1CP-201ENST00000419887 785 ntBASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 KRT18P21-201ENST00000515767 1272 ntBASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 DUX4L17-201ENST00000557360 1267 ntBASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 AC006449.5-201ENST00000610658 2098 ntBASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA3Q9Y5H8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA3Q9Y5H8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms