Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 AC073648.2-201ENST00000510116 352 ntBASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 AC025062.2-201ENST00000605477 670 ntBASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 AL353135.1-201ENST00000606729 504 ntBASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB13Q9Y5F0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 FAM197Y8-203ENST00000450145 560 ntBASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 RNPS1P1-201ENST00000507437 918 ntBASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 ACTG1P22-201ENST00000603793 1099 ntBASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 AC092723.2-201ENST00000624955 793 ntBASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 AC022211.2-201ENST00000585075 2527 ntBASIC18.98■□□□□ 0.63
PCDHB13Q9Y5F0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 GPR89P-201ENST00000407924 1495 ntBASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 AC020916.1-201ENST00000587762 1774 ntBASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 TPM4P1-201ENST00000436100 807 ntBASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB13Q9Y5F0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms