Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AL589182.2-201ENST00000619332 1049 ntBASIC16.85■□□□□ 0.29
SATB2Q9UPW6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SATB2Q9UPW6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 AC068880.1-201ENST00000507289 2297 ntBASIC16.84■□□□□ 0.29
SATB2Q9UPW6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 MIR4751-201ENST00000578027 74 ntBASIC16.84■□□□□ 0.29
SATB2Q9UPW6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SATB2Q9UPW6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SATB2Q9UPW6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SATB2Q9UPW6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SATB2Q9UPW6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 ELK2BP-201ENST00000415014 1224 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 AC103564.2-201ENST00000432853 1299 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 YBX1P5-201ENST00000509441 847 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 DUTP2-201ENST00000519164 463 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 AC004706.3-202ENST00000621574 984 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 AC092865.6-201ENST00000642101 219 ntBASIC16.83■□□□□ 0.28
SATB2Q9UPW6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SATB2Q9UPW6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SATB2Q9UPW6 AC006504.4-201ENST00000592118 1568 ntBASIC16.82■□□□□ 0.28
SATB2Q9UPW6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms