Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 AP002472.1-201ENST00000577490 586 ntBASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 AL645728.2-201ENST00000641974 660 ntBASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 AC139713.2-201ENST00000641328 2723 ntBASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 SNHG9-202ENST00000564014 471 ntBASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 AC092902.6-201ENST00000641783 218 ntBASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DENND2AQ9ULE3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 AC092919.2-201ENST00000623631 1645 ntBASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 AC116353.5-201ENST00000638148 1699 ntBASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DENND2AQ9ULE3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DENND2AQ9ULE3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND2AQ9ULE3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND2AQ9ULE3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND2AQ9ULE3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.65■□□□□ 0.9
DENND2AQ9ULE3 AC141586.5-201ENST00000624546 2050 ntBASIC20.65■□□□□ 0.9
DENND2AQ9ULE3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DENND2AQ9ULE3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms