Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 AL118508.1-201ENST00000613502 2345 ntBASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA9Q9UGM1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 PRYP5-201ENST00000451909 266 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 FGFR3P6-201ENST00000457012 610 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SCARNA2-201ENST00000458748 420 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 BX005266.1-201ENST00000473402 457 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 NKAPP1-205ENST00000585790 367 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 AL022326.1-202ENST00000641533 845 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 AC105020.1-201ENST00000435356 2205 ntBASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNA9Q9UGM1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 AC004817.3-201ENST00000602957 2129 ntBASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 OR6D1P-203ENST00000641209 4860 ntBASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 AC092053.1-201ENST00000605787 1936 ntBASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA9Q9UGM1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms