Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 PRSS29P-201ENST00000440800 595 ntBASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 DDX43P3-201ENST00000441064 443 ntBASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ALG1L5P-201ENST00000482043 771 ntBASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 AC027796.2-201ENST00000575326 344 ntBASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 AL513190.1-201ENST00000621254 727 ntBASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 HMGN1P19-201ENST00000436976 333 ntBASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 AP006288.1-201ENST00000446065 395 ntBASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 IGHV3-52-201ENST00000519770 353 ntBASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 AL596442.2-201ENST00000610240 980 ntBASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 AC097637.2-201ENST00000624096 1997 ntBASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HDAC6Q9UBN7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
HDAC6Q9UBN7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AL355385.1-201ENST00000606123 409 ntBASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AL805961.1-202ENST00000641562 540 ntBASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AC009336.1-201ENST00000608941 1553 ntBASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HDAC6Q9UBN7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms