Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ESPNP-201ENST00000270691 2015 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 AL590787.1-201ENST00000568856 1315 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 AL390961.4-201ENST00000623958 2535 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 AC004890.2-204ENST00000481968 304 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 HILS1-202ENST00000545329 423 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 AC084346.2-201ENST00000607097 949 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 AC017083.2-201ENST00000608069 979 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.97■□□□□ 0.31
NCDNQ9UBB6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NCDNQ9UBB6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NCDNQ9UBB6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NCDNQ9UBB6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 ACTG1P4-201ENST00000425123 1122 ntBASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AC092580.3-201ENST00000430932 139 ntBASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NCDNQ9UBB6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NCDNQ9UBB6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms