Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC1Q9NTX5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 AL121761.2-201ENST00000598007 1648 ntBASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 AC087163.2-201ENST00000457299 853 ntBASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 IGHV3-22-201ENST00000520721 359 ntBASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC1Q9NTX5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 GGTLC5P-201ENST00000617623 998 ntBASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
ECHDC1Q9NTX5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 SLC25A6P2-201ENST00000497974 877 ntBASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 AC079776.4-201ENST00000511039 504 ntBASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.84■□□□□ 0.93
ECHDC1Q9NTX5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.83■□□□□ 0.93
ECHDC1Q9NTX5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms