Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NLRC4Q9NPP4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 AC148477.5-201ENST00000625164 1645 ntBASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NLRC4Q9NPP4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 MIR3180-1-201ENST00000580374 94 ntBASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 MIR3180-3-201ENST00000584616 94 ntBASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NLRC4Q9NPP4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 PMPCAP1-201ENST00000508114 1576 ntBASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NLRC4Q9NPP4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms