Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM54Q9BYV2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM54Q9BYV2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM54Q9BYV2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM54Q9BYV2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM54Q9BYV2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.98■□□□□ 0.31
TRIM54Q9BYV2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 AL020989.1-201ENST00000422979 469 ntBASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 ABCD1P5-201ENST00000445663 754 ntBASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 AC138894.3-201ENST00000603787 634 ntBASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM54Q9BYV2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 HCG4P8-203ENST00000443049 980 ntBASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 NUS1P1-201ENST00000446295 882 ntBASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM54Q9BYV2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM54Q9BYV2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 AL135999.2-201ENST00000622438 1686 ntBASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM54Q9BYV2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms