Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 AC091167.2-201ENST00000579581 588 ntBASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RTFDC1Q9BY42 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 AC241585.1-201ENST00000433527 519 ntBASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 CR383656.12-201ENST00000549567 513 ntBASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 SPDYE22P-201ENST00000582158 798 ntBASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
RTFDC1Q9BY42 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RTFDC1Q9BY42 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTFDC1Q9BY42 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RTFDC1Q9BY42 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTFDC1Q9BY42 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 TOP3BP1-201ENST00000420768 1380 ntBASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 TSSK5P-201ENST00000423978 907 ntBASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 SERBP1P5-201ENST00000510079 1181 ntBASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 MIR4453-201ENST00000584019 89 ntBASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTFDC1Q9BY42 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.63■□□□□ 0.89
RTFDC1Q9BY42 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms