Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 AC009947.1-201ENST00000444350 727 ntBASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 POLD2P1-201ENST00000511220 997 ntBASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 FAM197Y3-203ENST00000618346 717 ntBASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 AL805961.1-202ENST00000641562 540 ntBASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSBP3Q9BWW4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SSBP3Q9BWW4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSBP3Q9BWW4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.33□□□□□ -0.11
SSBP3Q9BWW4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 AC140113.2-201ENST00000604370 208 ntBASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 AC008667.4-201ENST00000607370 168 ntBASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 PMS2P7-201ENST00000506558 1336 ntBASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 GNAS-203ENST00000306120 1878 ntBASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP3Q9BWW4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 AP002414.1-201ENST00000391405 1147 ntBASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP3Q9BWW4 RNA5SP416-201ENST00000516838 111 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms