Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 AL020989.1-201ENST00000422979 469 ntBASIC15.4■□□□□ 0.06
USB1Q9BQ65 LAGE3P1-201ENST00000425356 484 ntBASIC15.4■□□□□ 0.06
USB1Q9BQ65 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 AC002558.1-201ENST00000488906 803 ntBASIC15.4■□□□□ 0.06
USB1Q9BQ65 AC021087.4-201ENST00000563761 564 ntBASIC15.4■□□□□ 0.06
USB1Q9BQ65 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 AC139887.3-201ENST00000568585 713 ntBASIC15.4■□□□□ 0.06
USB1Q9BQ65 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 PGM5P2-202ENST00000637225 1043 ntBASIC15.4■□□□□ 0.06
USB1Q9BQ65 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
USB1Q9BQ65 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
USB1Q9BQ65 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 AC079776.4-201ENST00000511039 504 ntBASIC15.39■□□□□ 0.05
USB1Q9BQ65 OR7E14P-202ENST00000530490 1290 ntBASIC15.39■□□□□ 0.05
USB1Q9BQ65 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 NKAPP1-205ENST00000585790 367 ntBASIC15.39■□□□□ 0.05
USB1Q9BQ65 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
USB1Q9BQ65 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
USB1Q9BQ65 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USB1Q9BQ65 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USB1Q9BQ65 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USB1Q9BQ65 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.38■□□□□ 0.05
USB1Q9BQ65 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.38■□□□□ 0.05
USB1Q9BQ65 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
USB1Q9BQ65 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.38■□□□□ 0.05
USB1Q9BQ65 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
USB1Q9BQ65 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
USB1Q9BQ65 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.38■□□□□ 0.05
USB1Q9BQ65 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms