Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FGD4Q96M96 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.34■□□□□ 0.69
FGD4Q96M96 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.33■□□□□ 0.69
FGD4Q96M96 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.33■□□□□ 0.69
FGD4Q96M96 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FGD4Q96M96 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FGD4Q96M96 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.33■□□□□ 0.69
FGD4Q96M96 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
FGD4Q96M96 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FGD4Q96M96 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FGD4Q96M96 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FGD4Q96M96 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FGD4Q96M96 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 GPS2P2-201ENST00000430745 888 ntBASIC19.33■□□□□ 0.68
FGD4Q96M96 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AC079140.1-201ENST00000508039 487 ntBASIC19.33■□□□□ 0.68
FGD4Q96M96 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.33■□□□□ 0.68
FGD4Q96M96 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.33■□□□□ 0.68
FGD4Q96M96 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
FGD4Q96M96 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.33■□□□□ 0.68
FGD4Q96M96 AC133963.1-201ENST00000504166 1679 ntBASIC19.33■□□□□ 0.68
FGD4Q96M96 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FGD4Q96M96 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FGD4Q96M96 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.32■□□□□ 0.68
FGD4Q96M96 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.32■□□□□ 0.68
FGD4Q96M96 SLC25A6P5-201ENST00000435663 894 ntBASIC19.32■□□□□ 0.68
FGD4Q96M96 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.32■□□□□ 0.68
FGD4Q96M96 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.32■□□□□ 0.68
FGD4Q96M96 AC015911.4-201ENST00000588022 1070 ntBASIC19.32■□□□□ 0.68
FGD4Q96M96 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.32■□□□□ 0.68
FGD4Q96M96 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FGD4Q96M96 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.32■□□□□ 0.68
FGD4Q96M96 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.31■□□□□ 0.68
FGD4Q96M96 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
FGD4Q96M96 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
FGD4Q96M96 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
FGD4Q96M96 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FGD4Q96M96 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.31■□□□□ 0.68
FGD4Q96M96 TFAMP1-201ENST00000412727 736 ntBASIC19.31■□□□□ 0.68
FGD4Q96M96 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.31■□□□□ 0.68
FGD4Q96M96 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
FGD4Q96M96 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FGD4Q96M96 AC069335.1-201ENST00000489972 472 ntBASIC19.31■□□□□ 0.68
FGD4Q96M96 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms