Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 KRT126P-201ENST00000549467 1181 ntBASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 STK25P1-201ENST00000585406 838 ntBASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 AC124864.1-201ENST00000623408 392 ntBASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.91■□□□□ 0.78
CHAMP1Q96JM3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC132938.5-201ENST00000624980 1813 ntBASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC024909.3-201ENST00000611513 2257 ntBASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC026396.1-201ENST00000419388 421 ntBASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 UPK3BP1-201ENST00000428678 509 ntBASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AC124947.2-201ENST00000547118 1133 ntBASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHAMP1Q96JM3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CHAMP1Q96JM3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 AL391256.1-201ENST00000443260 1855 ntBASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 AP005901.3-202ENST00000581653 237 ntBASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 AL353801.3-201ENST00000609898 542 ntBASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.89■□□□□ 0.77
CHAMP1Q96JM3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHAMP1Q96JM3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms