Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DDX11Q96FC9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
DDX11Q96FC9 AL049757.1-201ENST00000616842 1596 ntBASIC20.39■□□□□ 0.85
DDX11Q96FC9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 AC104109.2-201ENST00000602919 1418 ntBASIC20.39■□□□□ 0.85
DDX11Q96FC9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 IGHV3-22-201ENST00000520721 359 ntBASIC20.39■□□□□ 0.85
DDX11Q96FC9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 MTDHP4-201ENST00000600287 670 ntBASIC20.39■□□□□ 0.85
DDX11Q96FC9 AC025062.2-201ENST00000605477 670 ntBASIC20.39■□□□□ 0.85
DDX11Q96FC9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
DDX11Q96FC9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DDX11Q96FC9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 AP000867.4-201ENST00000641616 219 ntBASIC20.38■□□□□ 0.85
DDX11Q96FC9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DDX11Q96FC9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DDX11Q96FC9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 AC016396.2-201ENST00000562575 1417 ntBASIC20.37■□□□□ 0.85
DDX11Q96FC9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 AC098831.1-202ENST00000438821 336 ntBASIC20.37■□□□□ 0.85
DDX11Q96FC9 IGHV3-52-201ENST00000519770 353 ntBASIC20.37■□□□□ 0.85
DDX11Q96FC9 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 AC012640.2-201ENST00000561606 901 ntBASIC20.37■□□□□ 0.85
DDX11Q96FC9 AC145285.3-201ENST00000564603 959 ntBASIC20.37■□□□□ 0.85
DDX11Q96FC9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
DDX11Q96FC9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DDX11Q96FC9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
DDX11Q96FC9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DDX11Q96FC9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms