Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRC58Q96CX6 AC022188.1-201ENST00000620960 1664 ntBASIC16.36■□□□□ 0.21
LRRC58Q96CX6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC58Q96CX6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC58Q96CX6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRC58Q96CX6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC58Q96CX6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AL135999.2-201ENST00000622438 1686 ntBASIC16.35■□□□□ 0.21
LRRC58Q96CX6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AC103564.2-201ENST00000432853 1299 ntBASIC16.35■□□□□ 0.21
LRRC58Q96CX6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AL359075.1-203ENST00000462729 1002 ntBASIC16.35■□□□□ 0.21
LRRC58Q96CX6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 STK25P1-201ENST00000585406 838 ntBASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AC145285.6-201ENST00000604632 637 ntBASIC16.35■□□□□ 0.21
LRRC58Q96CX6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 KRT8P10-201ENST00000450021 1447 ntBASIC16.35■□□□□ 0.21
LRRC58Q96CX6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC58Q96CX6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 AL645728.1-201ENST00000366221 2101 ntBASIC16.34■□□□□ 0.21
LRRC58Q96CX6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 LIN28AP1-201ENST00000429574 405 ntBASIC16.34■□□□□ 0.21
LRRC58Q96CX6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 AC010203.1-204ENST00000548782 407 ntBASIC16.34■□□□□ 0.21
LRRC58Q96CX6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 GPR89P-201ENST00000407924 1495 ntBASIC16.34■□□□□ 0.21
LRRC58Q96CX6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.34■□□□□ 0.21
LRRC58Q96CX6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC58Q96CX6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC58Q96CX6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC58Q96CX6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC58Q96CX6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LRRC58Q96CX6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LRRC58Q96CX6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 HBZP1-201ENST00000354915 429 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms