Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 AL359881.2-201ENST00000602973 570 ntBASIC21.74■■□□□ 1.07
SMARCC1Q92922 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC1Q92922 AC022144.1-201ENST00000602255 1580 ntBASIC21.74■■□□□ 1.07
SMARCC1Q92922 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.74■■□□□ 1.07
SMARCC1Q92922 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 RN7SL692P-201ENST00000464677 288 ntBASIC21.73■■□□□ 1.07
SMARCC1Q92922 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 AL138918.1-201ENST00000568306 659 ntBASIC21.73■■□□□ 1.07
SMARCC1Q92922 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC1Q92922 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.73■■□□□ 1.07
SMARCC1Q92922 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 COX5BP8-201ENST00000416911 349 ntBASIC21.72■■□□□ 1.07
SMARCC1Q92922 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 RARRES2P9-201ENST00000565168 469 ntBASIC21.72■■□□□ 1.07
SMARCC1Q92922 AC004233.3-201ENST00000607794 1269 ntBASIC21.72■■□□□ 1.07
SMARCC1Q92922 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCC1Q92922 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCC1Q92922 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCC1Q92922 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCC1Q92922 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms