Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 RNF216P1-203ENST00000404404 2427 ntBASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.45■□□□□ 0.38
SHROOM3Q8TF72 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 HTR5BP-201ENST00000430851 1154 ntBASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AD000864.1-201ENST00000624076 2295 ntBASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AP002414.3-201ENST00000589352 1468 ntBASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 AL589182.2-201ENST00000619332 1049 ntBASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHROOM3Q8TF72 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 UPF3AP3-201ENST00000420996 769 ntBASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AC098831.1-202ENST00000438821 336 ntBASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 DUX4L17-201ENST00000557360 1267 ntBASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AL691403.2-201ENST00000618460 490 ntBASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 PCDHB17P-201ENST00000539533 2393 ntBASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHROOM3Q8TF72 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHROOM3Q8TF72 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
SHROOM3Q8TF72 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.42■□□□□ 0.38
SHROOM3Q8TF72 PAWRP1-201ENST00000451083 565 ntBASIC17.42■□□□□ 0.38
SHROOM3Q8TF72 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms