Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 AP001350.2-201ENST00000625104 1094 ntBASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC22.52■■□□□ 1.2
COL22A1Q8NFW1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL22A1Q8NFW1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL22A1Q8NFW1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 EGFEM1P-202ENST00000431685 1563 ntBASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 SLC25A24-204ENST00000569674 2357 ntBASIC22.51■■□□□ 1.19
COL22A1Q8NFW1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL22A1Q8NFW1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 AC073439.1-201ENST00000624121 1774 ntBASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 RNA5SP410-201ENST00000516285 106 ntBASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL22A1Q8NFW1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 WFDC1-204ENST00000613603 549 ntBASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.48■■□□□ 1.19
COL22A1Q8NFW1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL22A1Q8NFW1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL22A1Q8NFW1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL22A1Q8NFW1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms