Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SPTSSBQ8NFR3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 AC106886.4-201ENST00000623557 2502 ntBASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
SPTSSBQ8NFR3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 LINC00602-201ENST00000629776 2065 ntBASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 AC112777.1-201ENST00000540175 1423 ntBASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SPTSSBQ8NFR3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms