Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 MIR943-201ENST00000401286 94 ntBASIC17■□□□□ 0.31
TMEFF1Q8IYR6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 AC055876.3-201ENST00000431496 288 ntBASIC17■□□□□ 0.31
TMEFF1Q8IYR6 RN7SL589P-201ENST00000481268 310 ntBASIC17■□□□□ 0.31
TMEFF1Q8IYR6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 AC243562.1-201ENST00000560672 389 ntBASIC17■□□□□ 0.31
TMEFF1Q8IYR6 AL135744.1-201ENST00000565098 629 ntBASIC17■□□□□ 0.31
TMEFF1Q8IYR6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 AC138649.4-201ENST00000612222 287 ntBASIC17■□□□□ 0.31
TMEFF1Q8IYR6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17■□□□□ 0.31
TMEFF1Q8IYR6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 TUBB3P1-201ENST00000405796 1332 ntBASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 AC138028.4-201ENST00000564984 1845 ntBASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 BASP1P1-201ENST00000430708 665 ntBASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 DUX4L17-201ENST00000557360 1267 ntBASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEFF1Q8IYR6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC236430.1-201ENST00000402231 743 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC015922.1-201ENST00000421102 1152 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 RBPMS2P1-201ENST00000437762 623 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC107918.2-201ENST00000530817 355 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC051619.7-201ENST00000568314 623 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AF228730.6-201ENST00000641497 218 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC084121.3-201ENST00000641716 218 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 AC105233.6-201ENST00000642093 218 ntBASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEFF1Q8IYR6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms