Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 FAM8A6P-201ENST00000407496 1135 ntBASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 AC096633.1-201ENST00000422446 749 ntBASIC17.78■□□□□ 0.44
CCDC25Q86WR0 SPDYE15P-201ENST00000424157 909 ntBASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ZNF444P1-201ENST00000559497 298 ntBASIC17.78■□□□□ 0.44
CCDC25Q86WR0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 AL138966.2-201ENST00000621997 464 ntBASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC25Q86WR0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.77■□□□□ 0.44
CCDC25Q86WR0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 AL441883.1-201ENST00000566170 1045 ntBASIC17.77■□□□□ 0.44
CCDC25Q86WR0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC25Q86WR0 HYMAI-201ENST00000635591 3347 ntBASIC17.77■□□□□ 0.44
CCDC25Q86WR0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC25Q86WR0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC25Q86WR0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 AC006449.5-201ENST00000610658 2098 ntBASIC17.76■□□□□ 0.43
CCDC25Q86WR0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 AL162727.3-201ENST00000635661 2787 ntBASIC17.76■□□□□ 0.43
CCDC25Q86WR0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 AC092597.1-201ENST00000487352 616 ntBASIC17.76■□□□□ 0.43
CCDC25Q86WR0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.76■□□□□ 0.43
CCDC25Q86WR0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC25Q86WR0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC25Q86WR0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms