Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AC005332.3-201ENST00000589904 676 ntBASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AL031432.5-201ENST00000641059 760 ntBASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 MST1L-201ENST00000442552 2185 ntBASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 AL390719.2-201ENST00000606993 987 ntBASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRTM1Q86UE6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 COX11P1-201ENST00000489116 835 ntBASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 AC122714.2-201ENST00000502787 707 ntBASIC14.92□□□□□ -0.02
LRRTM1Q86UE6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms