Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AC104076.2-201ENST00000448912 469 ntBASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 VENTXP7-201ENST00000475503 772 ntBASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AC111152.3-201ENST00000569699 673 ntBASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 IGHV3-41-201ENST00000613121 348 ntBASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AC124864.1-201ENST00000623408 392 ntBASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.63
MRPL55Q7Z7F7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
MRPL55Q7Z7F7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AC007967.3-201ENST00000434308 558 ntBASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 DUX4L26-201ENST00000489078 1255 ntBASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AL592071.1-201ENST00000611956 408 ntBASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 AC022211.2-201ENST00000585075 2527 ntBASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
MRPL55Q7Z7F7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms