Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RGPD4Q7Z3J3 AC018665.1-201ENST00000622927 1362 ntBASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RGPD4Q7Z3J3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 KRT8P12-202ENST00000472924 1397 ntBASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 AC073439.1-201ENST00000624121 1774 ntBASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RGPD4Q7Z3J3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 NOC2LP1-202ENST00000452600 2235 ntBASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 AL583810.1-201ENST00000553344 1045 ntBASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.33■■□□□ 1.01
RGPD4Q7Z3J3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 AC108725.1-201ENST00000495472 409 ntBASIC21.33■■□□□ 1
RGPD4Q7Z3J3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RGPD4Q7Z3J3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.32■■□□□ 1
RGPD4Q7Z3J3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms