Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AP003097.1-201ENST00000530657 1135 ntBASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AC098934.4-201ENST00000564127 592 ntBASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AC067750.1-201ENST00000608826 6545 ntBASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP4Q6PIL6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 REXO1L11P-201ENST00000620964 1927 ntBASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 UNC93B5-201ENST00000530315 699 ntBASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP4Q6PIL6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.32□□□□□ -0.28
KCNIP4Q6PIL6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms