Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
CASC4Q6P4E1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AC016734.2-201ENST00000624325 1377 ntBASIC17.54■□□□□ 0.4
CASC4Q6P4E1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 STK19B-204ENST00000512515 211 ntBASIC17.54■□□□□ 0.4
CASC4Q6P4E1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AC087388.1-201ENST00000571370 1112 ntBASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 UBALD1-205ENST00000590891 2641 ntBASIC17.54■□□□□ 0.4
CASC4Q6P4E1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CASC4Q6P4E1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 MINOS1P3-201ENST00000457048 203 ntBASIC17.53■□□□□ 0.4
CASC4Q6P4E1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 FAM86EP-206ENST00000510506 987 ntBASIC17.53■□□□□ 0.4
CASC4Q6P4E1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.53■□□□□ 0.4
CASC4Q6P4E1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CASC4Q6P4E1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 AC092068.3-201ENST00000587894 2016 ntBASIC17.52■□□□□ 0.4
CASC4Q6P4E1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CASC4Q6P4E1 TSSC2-201ENST00000450217 709 ntBASIC17.52■□□□□ 0.4
CASC4Q6P4E1 AP005901.3-202ENST00000581653 237 ntBASIC17.52■□□□□ 0.4
CASC4Q6P4E1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms