Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AL139288.1-201ENST00000623748 933 ntBASIC17.8■□□□□ 0.44
LRRC38Q5VT99 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 AL022326.1-202ENST00000641533 845 ntBASIC17.8■□□□□ 0.44
LRRC38Q5VT99 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC38Q5VT99 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 TERC-201ENST00000602385 541 ntBASIC17.79■□□□□ 0.44
LRRC38Q5VT99 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 LINC00895-201ENST00000629028 1637 ntBASIC17.79■□□□□ 0.44
LRRC38Q5VT99 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC38Q5VT99 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 FOSL1P1-201ENST00000511041 816 ntBASIC17.78■□□□□ 0.44
LRRC38Q5VT99 AC093458.2-201ENST00000623150 629 ntBASIC17.78■□□□□ 0.44
LRRC38Q5VT99 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 NCF1C-201ENST00000438382 1427 ntBASIC17.78■□□□□ 0.44
LRRC38Q5VT99 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRRC38Q5VT99 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC38Q5VT99 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms