Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DCAF4L1Q3SXM0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DCAF4L1Q3SXM0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 LINC02012-201ENST00000608206 1725 ntBASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 MKNK2P1-201ENST00000437526 628 ntBASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 AC005829.1-201ENST00000570002 483 ntBASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 AC068137.2-201ENST00000605408 478 ntBASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 AL645728.2-201ENST00000641974 660 ntBASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DCAF4L1Q3SXM0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 ALG1L5P-201ENST00000482043 771 ntBASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 AC124947.2-201ENST00000547118 1133 ntBASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DCAF4L1Q3SXM0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 TOP3BP1-201ENST00000420768 1380 ntBASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 HTR5BP-201ENST00000430851 1154 ntBASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 YBX1P5-201ENST00000509441 847 ntBASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 DUX4L17-201ENST00000557360 1267 ntBASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 AC055717.3-201ENST00000622967 595 ntBASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.47■□□□□ 0.55
DCAF4L1Q3SXM0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms