Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 KRT18P29-201ENST00000397031 1267 ntBASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 SLC25A1P4-201ENST00000567977 778 ntBASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 WWOX-216ENST00000569818 525 ntBASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 TNRC18P2-201ENST00000417666 2714 ntBASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AL391256.1-201ENST00000443260 1855 ntBASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC6LQ2NKX8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 AC133681.1-201ENST00000465482 601 ntBASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 AC008687.5-201ENST00000593746 558 ntBASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 AC073648.6-201ENST00000641589 218 ntBASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC6LQ2NKX8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERCC6LQ2NKX8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC6LQ2NKX8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 AL645728.1-201ENST00000366221 2101 ntBASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC6LQ2NKX8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms