Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 AC005829.1-201ENST00000570002 483 ntBASIC20.63■□□□□ 0.89
RFX7Q2KHR2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 GGTLC5P-201ENST00000617623 998 ntBASIC20.63■□□□□ 0.89
RFX7Q2KHR2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RFX7Q2KHR2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX7Q2KHR2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 HTR5BP-201ENST00000430851 1154 ntBASIC20.61■□□□□ 0.89
RFX7Q2KHR2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 HMGN1P19-201ENST00000436976 333 ntBASIC20.61■□□□□ 0.89
RFX7Q2KHR2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX7Q2KHR2 ELL2P1-201ENST00000413990 1906 ntBASIC20.61■□□□□ 0.89
RFX7Q2KHR2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 AC004877.2-201ENST00000623941 599 ntBASIC20.6■□□□□ 0.89
RFX7Q2KHR2 AC079781.4-201ENST00000641908 219 ntBASIC20.6■□□□□ 0.89
RFX7Q2KHR2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX7Q2KHR2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms