Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBXN1Q04323 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.82■□□□□ 0.6
UBXN1Q04323 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 RCN1P1-201ENST00000400413 996 ntBASIC18.82■□□□□ 0.6
UBXN1Q04323 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.82■□□□□ 0.6
UBXN1Q04323 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.82■□□□□ 0.6
UBXN1Q04323 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 GPR89P-201ENST00000407924 1495 ntBASIC18.82■□□□□ 0.6
UBXN1Q04323 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
UBXN1Q04323 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.82■□□□□ 0.6
UBXN1Q04323 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
UBXN1Q04323 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBXN1Q04323 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.82■□□□□ 0.6
UBXN1Q04323 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBXN1Q04323 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 AC003669.1-201ENST00000334569 611 ntBASIC18.81■□□□□ 0.6
UBXN1Q04323 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.81■□□□□ 0.6
UBXN1Q04323 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.81■□□□□ 0.6
UBXN1Q04323 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.81■□□□□ 0.6
UBXN1Q04323 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBXN1Q04323 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBXN1Q04323 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
UBXN1Q04323 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.8■□□□□ 0.6
UBXN1Q04323 KLF4P1-201ENST00000412782 1185 ntBASIC18.8■□□□□ 0.6
UBXN1Q04323 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.8■□□□□ 0.6
UBXN1Q04323 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 VENTXP7-201ENST00000475503 772 ntBASIC18.8■□□□□ 0.6
UBXN1Q04323 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.8■□□□□ 0.6
UBXN1Q04323 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AP005901.3-202ENST00000581653 237 ntBASIC18.8■□□□□ 0.6
UBXN1Q04323 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.8■□□□□ 0.6
UBXN1Q04323 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AD001527.2-201ENST00000622994 785 ntBASIC18.8■□□□□ 0.6
UBXN1Q04323 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UBXN1Q04323 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBXN1Q04323 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
UBXN1Q04323 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms