Protein–RNA interactions for Protein: Q03591

CFHR1, Complement factor H-related protein 1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1Q03591 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFHR1Q03591 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.27■□□□□ 0.2
CFHR1Q03591 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.27■□□□□ 0.2
CFHR1Q03591 AC236430.1-201ENST00000402231 743 ntBASIC16.27■□□□□ 0.2
CFHR1Q03591 TFAMP1-201ENST00000412727 736 ntBASIC16.27■□□□□ 0.2
CFHR1Q03591 AL627223.1-201ENST00000416693 442 ntBASIC16.27■□□□□ 0.2
CFHR1Q03591 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.27■□□□□ 0.2
CFHR1Q03591 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFHR1Q03591 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.27■□□□□ 0.2
CFHR1Q03591 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.27■□□□□ 0.2
CFHR1Q03591 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CFHR1Q03591 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CFHR1Q03591 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFHR1Q03591 LINC00628-201ENST00000628516 1289 ntBASIC16.27■□□□□ 0.2
CFHR1Q03591 AC012569.1-201ENST00000591191 1524 ntBASIC16.27■□□□□ 0.2
CFHR1Q03591 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFHR1Q03591 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CFHR1Q03591 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CFHR1Q03591 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.27■□□□□ 0.19
CFHR1Q03591 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CFHR1Q03591 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFHR1Q03591 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.27■□□□□ 0.19
CFHR1Q03591 AC116353.5-201ENST00000638148 1699 ntBASIC16.27■□□□□ 0.19
CFHR1Q03591 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
CFHR1Q03591 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFHR1Q03591 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFHR1Q03591 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.26■□□□□ 0.19
CFHR1Q03591 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CFHR1Q03591 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.26■□□□□ 0.19
CFHR1Q03591 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.26■□□□□ 0.19
CFHR1Q03591 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CFHR1Q03591 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.26■□□□□ 0.19
CFHR1Q03591 AC067863.1-201ENST00000494933 530 ntBASIC16.26■□□□□ 0.19
CFHR1Q03591 AC079140.1-201ENST00000508039 487 ntBASIC16.26■□□□□ 0.19
CFHR1Q03591 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.26■□□□□ 0.19
CFHR1Q03591 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
CFHR1Q03591 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.26■□□□□ 0.19
CFHR1Q03591 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CFHR1Q03591 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CFHR1Q03591 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CFHR1Q03591 AL138688.1-201ENST00000624851 1594 ntBASIC16.26■□□□□ 0.19
CFHR1Q03591 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.25■□□□□ 0.19
CFHR1Q03591 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 AL353732.1-201ENST00000569618 1459 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 OR8S1-201ENST00000310194 1080 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 FAM58DP-201ENST00000428076 619 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.25■□□□□ 0.19
CFHR1Q03591 AC002472.2-201ENST00000442739 958 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 SPDYE11-202ENST00000450699 704 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.25■□□□□ 0.19
CFHR1Q03591 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CFHR1Q03591 AC022494.1-201ENST00000466044 728 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 FAM86C2P-203ENST00000528684 1004 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CFHR1Q03591 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CFHR1Q03591 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.25■□□□□ 0.19
CFHR1Q03591 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.25■□□□□ 0.19
CFHR1Q03591 SPDYE9P-201ENST00000570642 692 ntBASIC16.25■□□□□ 0.19
CFHR1Q03591 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.25■□□□□ 0.19
CFHR1Q03591 AL390955.2-201ENST00000603032 514 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms