Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 AC114341.1-201ENST00000618070 349 ntBASIC16.56■□□□□ 0.24
HMGCS1Q01581 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 FRMD8P1-201ENST00000440433 1524 ntBASIC16.55■□□□□ 0.24
HMGCS1Q01581 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 PCDHB19P-201ENST00000570871 2371 ntBASIC16.55■□□□□ 0.24
HMGCS1Q01581 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 AC092119.3-201ENST00000612618 583 ntBASIC16.55■□□□□ 0.24
HMGCS1Q01581 NPAP1P7-201ENST00000613027 823 ntBASIC16.55■□□□□ 0.24
HMGCS1Q01581 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGCS1Q01581 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGCS1Q01581 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 AC104819.1-201ENST00000504587 486 ntBASIC16.54■□□□□ 0.24
HMGCS1Q01581 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGCS1Q01581 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGCS1Q01581 GPR89P-201ENST00000407924 1495 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms