Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC106886.4-201ENST00000623557 2502 ntBASIC16.18■□□□□ 0.18
TRA2BP62995 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
TRA2BP62995 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRA2BP62995 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.18■□□□□ 0.18
TRA2BP62995 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
TRA2BP62995 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRA2BP62995 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.17■□□□□ 0.18
TRA2BP62995 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.17■□□□□ 0.18
TRA2BP62995 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.17■□□□□ 0.18
TRA2BP62995 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.17■□□□□ 0.18
TRA2BP62995 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 LAGE3P1-201ENST00000425356 484 ntBASIC16.17■□□□□ 0.18
TRA2BP62995 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.17■□□□□ 0.18
TRA2BP62995 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.17■□□□□ 0.18
TRA2BP62995 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.17■□□□□ 0.18
TRA2BP62995 AC021087.4-201ENST00000563761 564 ntBASIC16.17■□□□□ 0.18
TRA2BP62995 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.17■□□□□ 0.18
TRA2BP62995 AC006557.2-201ENST00000592985 1240 ntBASIC16.17■□□□□ 0.18
TRA2BP62995 AC012313.10-201ENST00000623509 926 ntBASIC16.17■□□□□ 0.18
TRA2BP62995 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.17■□□□□ 0.18
TRA2BP62995 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRA2BP62995 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRA2BP62995 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRA2BP62995 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
TRA2BP62995 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRA2BP62995 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRA2BP62995 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.16■□□□□ 0.18
TRA2BP62995 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.16■□□□□ 0.18
TRA2BP62995 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.16■□□□□ 0.18
TRA2BP62995 AC025062.2-201ENST00000605477 670 ntBASIC16.16■□□□□ 0.18
TRA2BP62995 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
TRA2BP62995 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 AF228730.7-201ENST00000641842 219 ntBASIC16.16■□□□□ 0.18
TRA2BP62995 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRA2BP62995 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.16■□□□□ 0.18
TRA2BP62995 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRA2BP62995 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRA2BP62995 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRA2BP62995 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.15■□□□□ 0.18
TRA2BP62995 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRA2BP62995 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRA2BP62995 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRA2BP62995 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.15■□□□□ 0.18
TRA2BP62995 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.15■□□□□ 0.18
TRA2BP62995 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRA2BP62995 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRA2BP62995 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms