Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.25■□□□□ 0.35
AP1S1P61966 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.25■□□□□ 0.35
AP1S1P61966 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
AP1S1P61966 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.25■□□□□ 0.35
AP1S1P61966 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
AP1S1P61966 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.25■□□□□ 0.35
AP1S1P61966 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
AP1S1P61966 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S1P61966 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.24■□□□□ 0.35
AP1S1P61966 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S1P61966 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
AP1S1P61966 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.24■□□□□ 0.35
AP1S1P61966 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S1P61966 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.24■□□□□ 0.35
AP1S1P61966 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
AP1S1P61966 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP1S1P61966 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
AP1S1P61966 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
AP1S1P61966 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.23■□□□□ 0.35
AP1S1P61966 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
AP1S1P61966 CRYGEP-201ENST00000412192 528 ntBASIC17.23■□□□□ 0.35
AP1S1P61966 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.23■□□□□ 0.35
AP1S1P61966 VN2R19P-201ENST00000442399 1052 ntBASIC17.23■□□□□ 0.35
AP1S1P61966 SLC25A6P2-201ENST00000497974 877 ntBASIC17.23■□□□□ 0.35
AP1S1P61966 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.23■□□□□ 0.35
AP1S1P61966 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
AP1S1P61966 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.23■□□□□ 0.35
AP1S1P61966 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S1P61966 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S1P61966 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S1P61966 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.23■□□□□ 0.35
AP1S1P61966 AC002310.6-201ENST00000624451 1377 ntBASIC17.23■□□□□ 0.35
AP1S1P61966 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
AP1S1P61966 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP1S1P61966 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
AP1S1P61966 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 AC129492.6-201ENST00000611383 1305 ntBASIC17.22■□□□□ 0.35
AP1S1P61966 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AP1S1P61966 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.22■□□□□ 0.35
AP1S1P61966 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.22■□□□□ 0.35
AP1S1P61966 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP1S1P61966 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms