Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.78■□□□□ 0.12
CLDN20P56880 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN20P56880 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN20P56880 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN20P56880 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN20P56880 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.77■□□□□ 0.12
CLDN20P56880 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLDN20P56880 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN20P56880 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 AC079776.2-201ENST00000641154 1609 ntBASIC15.77■□□□□ 0.12
CLDN20P56880 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 AC005104.2-201ENST00000427818 678 ntBASIC15.77■□□□□ 0.12
CLDN20P56880 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
CLDN20P56880 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CLDN20P56880 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLDN20P56880 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN20P56880 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLDN20P56880 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDN20P56880 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDN20P56880 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.77■□□□□ 0.12
CLDN20P56880 SLC25A6P4-201ENST00000586535 553 ntBASIC15.77■□□□□ 0.12
CLDN20P56880 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.77■□□□□ 0.12
CLDN20P56880 AC148477.8-201ENST00000624298 468 ntBASIC15.77■□□□□ 0.12
CLDN20P56880 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.77■□□□□ 0.12
CLDN20P56880 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
CLDN20P56880 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 PKD1P1-201ENST00000458669 6805 ntBASIC15.77■□□□□ 0.11
CLDN20P56880 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.77■□□□□ 0.11
CLDN20P56880 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDN20P56880 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.77■□□□□ 0.11
CLDN20P56880 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CLDN20P56880 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.77■□□□□ 0.11
CLDN20P56880 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 LINC00304-203ENST00000565008 1864 ntBASIC15.76■□□□□ 0.11
CLDN20P56880 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 KLF4P1-201ENST00000412782 1185 ntBASIC15.76■□□□□ 0.11
CLDN20P56880 SPDYE21P-201ENST00000413323 827 ntBASIC15.76■□□□□ 0.11
CLDN20P56880 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 BX005266.1-201ENST00000473402 457 ntBASIC15.76■□□□□ 0.11
CLDN20P56880 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 RNPS1P1-201ENST00000507437 918 ntBASIC15.76■□□□□ 0.11
CLDN20P56880 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 AC021087.4-201ENST00000563761 564 ntBASIC15.76■□□□□ 0.11
CLDN20P56880 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDN20P56880 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN20P56880 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN20P56880 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDN20P56880 AL139288.1-201ENST00000623748 933 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms