Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.94■□□□□ 0.14
PER3P56645 MIR3197-201ENST00000582241 73 ntBASIC15.94■□□□□ 0.14
PER3P56645 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.94■□□□□ 0.14
PER3P56645 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PER3P56645 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PER3P56645 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PER3P56645 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PER3P56645 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.93■□□□□ 0.14
PER3P56645 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.93■□□□□ 0.14
PER3P56645 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.93■□□□□ 0.14
PER3P56645 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.93■□□□□ 0.14
PER3P56645 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.93■□□□□ 0.14
PER3P56645 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 AC006557.2-201ENST00000592985 1240 ntBASIC15.93■□□□□ 0.14
PER3P56645 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.93■□□□□ 0.14
PER3P56645 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PER3P56645 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PER3P56645 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PER3P56645 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.92■□□□□ 0.14
PER3P56645 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
PER3P56645 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PER3P56645 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PER3P56645 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms