Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LBX1P52954 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LBX1P52954 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
LBX1P52954 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
LBX1P52954 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 RPS2P36-201ENST00000456516 831 ntBASIC19.1■□□□□ 0.65
LBX1P52954 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.1■□□□□ 0.65
LBX1P52954 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.1■□□□□ 0.65
LBX1P52954 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.1■□□□□ 0.65
LBX1P52954 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LBX1P52954 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
LBX1P52954 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LBX1P52954 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LBX1P52954 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LBX1P52954 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.09■□□□□ 0.65
LBX1P52954 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 RPL13AP20-201ENST00000459725 609 ntBASIC19.09■□□□□ 0.65
LBX1P52954 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.09■□□□□ 0.65
LBX1P52954 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.09■□□□□ 0.65
LBX1P52954 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.09■□□□□ 0.65
LBX1P52954 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.09■□□□□ 0.65
LBX1P52954 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.09■□□□□ 0.65
LBX1P52954 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.09■□□□□ 0.65
LBX1P52954 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.09■□□□□ 0.65
LBX1P52954 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LBX1P52954 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.09■□□□□ 0.65
LBX1P52954 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LBX1P52954 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.08■□□□□ 0.65
LBX1P52954 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.08■□□□□ 0.65
LBX1P52954 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
LBX1P52954 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LBX1P52954 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LBX1P52954 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.08■□□□□ 0.64
LBX1P52954 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 AP001258.2-201ENST00000529891 490 ntBASIC19.08■□□□□ 0.64
LBX1P52954 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.08■□□□□ 0.64
LBX1P52954 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LBX1P52954 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 MIR7845-201ENST00000618396 99 ntBASIC19.08■□□□□ 0.64
LBX1P52954 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.08■□□□□ 0.64
LBX1P52954 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.08■□□□□ 0.64
LBX1P52954 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.08■□□□□ 0.64
LBX1P52954 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.08■□□□□ 0.64
LBX1P52954 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LBX1P52954 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.08■□□□□ 0.64
LBX1P52954 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.07■□□□□ 0.64
LBX1P52954 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.07■□□□□ 0.64
LBX1P52954 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 FAM220BP-201ENST00000377689 816 ntBASIC19.07■□□□□ 0.64
LBX1P52954 AC104457.1-201ENST00000401024 814 ntBASIC19.07■□□□□ 0.64
LBX1P52954 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
LBX1P52954 RPL7P3-201ENST00000441388 714 ntBASIC19.07■□□□□ 0.64
LBX1P52954 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.07■□□□□ 0.64
LBX1P52954 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
LBX1P52954 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.07■□□□□ 0.64
LBX1P52954 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.07■□□□□ 0.64
LBX1P52954 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
LBX1P52954 AL022328.1-201ENST00000610050 478 ntBASIC19.07■□□□□ 0.64
LBX1P52954 AC009542.2-202ENST00000619004 1067 ntBASIC19.07■□□□□ 0.64
LBX1P52954 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.07■□□□□ 0.64
LBX1P52954 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LBX1P52954 AC007952.6-201ENST00000573168 2673 ntBASIC19.07■□□□□ 0.64
LBX1P52954 AC003957.1-201ENST00000625108 2673 ntBASIC19.07■□□□□ 0.64
LBX1P52954 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LBX1P52954 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.06■□□□□ 0.64
LBX1P52954 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
LBX1P52954 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms