Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
RNF144AP50876 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
RNF144AP50876 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF144AP50876 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.99■□□□□ 0.15
RNF144AP50876 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF144AP50876 CLEC4GP1-201ENST00000596555 870 ntBASIC15.99■□□□□ 0.15
RNF144AP50876 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF144AP50876 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 AC009336.1-201ENST00000608941 1553 ntBASIC15.99■□□□□ 0.15
RNF144AP50876 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 AC093525.9-201ENST00000624961 1746 ntBASIC15.99■□□□□ 0.15
RNF144AP50876 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF144AP50876 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF144AP50876 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 MYCLP1-201ENST00000372451 1075 ntBASIC15.98■□□□□ 0.15
RNF144AP50876 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF144AP50876 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF144AP50876 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 BX005266.1-201ENST00000473402 457 ntBASIC15.98■□□□□ 0.15
RNF144AP50876 KRT18P56-201ENST00000507275 550 ntBASIC15.98■□□□□ 0.15
RNF144AP50876 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF144AP50876 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF144AP50876 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.98■□□□□ 0.15
RNF144AP50876 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 AC116353.5-201ENST00000638148 1699 ntBASIC15.98■□□□□ 0.15
RNF144AP50876 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF144AP50876 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF144AP50876 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RNF144AP50876 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RNF144AP50876 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 AC005915.1-201ENST00000624912 2018 ntBASIC15.97■□□□□ 0.15
RNF144AP50876 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF144AP50876 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF144AP50876 POM121L3P-201ENST00000419331 1163 ntBASIC15.97■□□□□ 0.15
RNF144AP50876 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF144AP50876 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms