Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 LINC02560-201ENST00000596379 459 ntBASIC18.89■□□□□ 0.61
CDK7P50613 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.89■□□□□ 0.61
CDK7P50613 AC008761.3-201ENST00000624803 892 ntBASIC18.89■□□□□ 0.61
CDK7P50613 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDK7P50613 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.89■□□□□ 0.61
CDK7P50613 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDK7P50613 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDK7P50613 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.89■□□□□ 0.61
CDK7P50613 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK7P50613 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK7P50613 TREML5P-201ENST00000421694 576 ntBASIC18.88■□□□□ 0.61
CDK7P50613 SPDYE14P-201ENST00000442619 822 ntBASIC18.88■□□□□ 0.61
CDK7P50613 AC125807.1-201ENST00000483097 614 ntBASIC18.88■□□□□ 0.61
CDK7P50613 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.88■□□□□ 0.61
CDK7P50613 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.88■□□□□ 0.61
CDK7P50613 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDK7P50613 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK7P50613 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.88■□□□□ 0.61
CDK7P50613 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDK7P50613 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDK7P50613 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.88■□□□□ 0.61
CDK7P50613 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK7P50613 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 AL354751.1-201ENST00000412768 1863 ntBASIC18.87■□□□□ 0.61
CDK7P50613 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.87■□□□□ 0.61
CDK7P50613 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 SLC25A39P2-201ENST00000537614 270 ntBASIC18.87■□□□□ 0.61
CDK7P50613 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDK7P50613 AL139327.4-201ENST00000612362 153 ntBASIC18.87■□□□□ 0.61
CDK7P50613 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.87■□□□□ 0.61
CDK7P50613 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CDK7P50613 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDK7P50613 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDK7P50613 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDK7P50613 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.86■□□□□ 0.61
CDK7P50613 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDK7P50613 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 GK-202ENST00000378941 458 ntTSL 3 BASIC18.86■□□□□ 0.61
CDK7P50613 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDK7P50613 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDK7P50613 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.86■□□□□ 0.61
CDK7P50613 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.86■□□□□ 0.61
CDK7P50613 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDK7P50613 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms