Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC34P49427 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDC34P49427 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDC34P49427 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDC34P49427 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC34P49427 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.61□□□□□ -0.23
CDC34P49427 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.61□□□□□ -0.23
CDC34P49427 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 BX088651.1-201ENST00000540551 451 ntBASIC13.61□□□□□ -0.23
CDC34P49427 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 AP005242.2-201ENST00000580065 1175 ntBASIC13.61□□□□□ -0.23
CDC34P49427 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CDC34P49427 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CDC34P49427 AL135905.2-201ENST00000584934 1404 ntBASIC13.61□□□□□ -0.23
CDC34P49427 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.61□□□□□ -0.23
CDC34P49427 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDC34P49427 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.61□□□□□ -0.23
CDC34P49427 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.61□□□□□ -0.23
CDC34P49427 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
CDC34P49427 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 PAUPAR-201ENST00000630360 2965 ntBASIC13.6□□□□□ -0.23
CDC34P49427 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CDC34P49427 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 PVRIG2P-201ENST00000435460 978 ntBASIC13.6□□□□□ -0.23
CDC34P49427 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 CCR12P-201ENST00000446203 998 ntBASIC13.6□□□□□ -0.23
CDC34P49427 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC13.6□□□□□ -0.23
CDC34P49427 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.6□□□□□ -0.23
CDC34P49427 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 AC006058.3-201ENST00000606217 1069 ntBASIC13.6□□□□□ -0.23
CDC34P49427 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 TCAF2P1-201ENST00000291129 2421 ntBASIC13.6□□□□□ -0.23
CDC34P49427 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDC34P49427 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CDC34P49427 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CDC34P49427 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CDC34P49427 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC34P49427 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CDC34P49427 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CDC34P49427 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CDC34P49427 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC34P49427 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.59□□□□□ -0.23
CDC34P49427 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms