Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HADHAP40939 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
HADHAP40939 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HADHAP40939 AP005117.1-201ENST00000584346 1413 ntBASIC17.39■□□□□ 0.38
HADHAP40939 SIGLEC16-201ENST00000599858 1437 ntBASIC17.39■□□□□ 0.38
HADHAP40939 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 AC060834.1-201ENST00000443027 2032 ntBASIC17.39■□□□□ 0.37
HADHAP40939 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
HADHAP40939 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 RBM17P3-201ENST00000417687 1192 ntBASIC17.39■□□□□ 0.37
HADHAP40939 SIGLEC30P-201ENST00000455569 941 ntBASIC17.39■□□□□ 0.37
HADHAP40939 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.39■□□□□ 0.37
HADHAP40939 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.39■□□□□ 0.37
HADHAP40939 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.37
HADHAP40939 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HADHAP40939 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.39■□□□□ 0.37
HADHAP40939 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HADHAP40939 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.39■□□□□ 0.37
HADHAP40939 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HADHAP40939 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.39■□□□□ 0.37
HADHAP40939 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HADHAP40939 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
HADHAP40939 SPDYE21P-201ENST00000413323 827 ntBASIC17.38■□□□□ 0.37
HADHAP40939 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.38■□□□□ 0.37
HADHAP40939 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.38■□□□□ 0.37
HADHAP40939 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.38■□□□□ 0.37
HADHAP40939 AC106795.1-205ENST00000512851 1056 ntBASIC17.38■□□□□ 0.37
HADHAP40939 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.38■□□□□ 0.37
HADHAP40939 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.38■□□□□ 0.37
HADHAP40939 AL691432.3-201ENST00000621860 400 ntBASIC17.38■□□□□ 0.37
HADHAP40939 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.38■□□□□ 0.37
HADHAP40939 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HADHAP40939 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.38■□□□□ 0.37
HADHAP40939 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.38■□□□□ 0.37
HADHAP40939 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HADHAP40939 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.37■□□□□ 0.37
HADHAP40939 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HADHAP40939 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.37■□□□□ 0.37
HADHAP40939 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 AC079776.2-201ENST00000641154 1609 ntBASIC17.37■□□□□ 0.37
HADHAP40939 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.37■□□□□ 0.37
HADHAP40939 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.37■□□□□ 0.37
HADHAP40939 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.37■□□□□ 0.37
HADHAP40939 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.37■□□□□ 0.37
HADHAP40939 AC073592.4-201ENST00000623827 446 ntBASIC17.37■□□□□ 0.37
HADHAP40939 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.37■□□□□ 0.37
HADHAP40939 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HADHAP40939 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.37■□□□□ 0.37
HADHAP40939 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HADHAP40939 AL118508.1-201ENST00000613502 2345 ntBASIC17.37■□□□□ 0.37
HADHAP40939 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HADHAP40939 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms