Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AL353807.1-201ENST00000427475 662 ntBASIC17.26■□□□□ 0.35
LSP1P33241 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.26■□□□□ 0.35
LSP1P33241 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
LSP1P33241 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.26■□□□□ 0.35
LSP1P33241 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.26■□□□□ 0.35
LSP1P33241 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.26■□□□□ 0.35
LSP1P33241 AC013268.4-201ENST00000637413 2228 ntBASIC17.26■□□□□ 0.35
LSP1P33241 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LSP1P33241 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LSP1P33241 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LSP1P33241 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LSP1P33241 AL603832.2-201ENST00000566195 2125 ntBASIC17.26■□□□□ 0.35
LSP1P33241 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.26■□□□□ 0.35
LSP1P33241 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LSP1P33241 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 TSPY20P-201ENST00000450910 630 ntBASIC17.25■□□□□ 0.35
LSP1P33241 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.25■□□□□ 0.35
LSP1P33241 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 SLC25A1P4-201ENST00000567977 778 ntBASIC17.25■□□□□ 0.35
LSP1P33241 AC006058.3-201ENST00000606217 1069 ntBASIC17.25■□□□□ 0.35
LSP1P33241 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LSP1P33241 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSP1P33241 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LSP1P33241 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.24■□□□□ 0.35
LSP1P33241 AC113404.2-201ENST00000507884 177 ntBASIC17.24■□□□□ 0.35
LSP1P33241 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.24■□□□□ 0.35
LSP1P33241 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LSP1P33241 MIR4651-201ENST00000582622 73 ntBASIC17.24■□□□□ 0.35
LSP1P33241 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.24■□□□□ 0.35
LSP1P33241 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 AC010491.1-201ENST00000563101 2797 ntBASIC17.24■□□□□ 0.35
LSP1P33241 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
LSP1P33241 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSP1P33241 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSP1P33241 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.24■□□□□ 0.35
LSP1P33241 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms