Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.09■□□□□ 0.97
TM4SF1P30408 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.09■□□□□ 0.97
TM4SF1P30408 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.09■□□□□ 0.97
TM4SF1P30408 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TM4SF1P30408 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF1P30408 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.08■□□□□ 0.97
TM4SF1P30408 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF1P30408 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF1P30408 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF1P30408 ATP5G2P4-201ENST00000442175 420 ntBASIC21.08■□□□□ 0.97
TM4SF1P30408 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TM4SF1P30408 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF1P30408 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF1P30408 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF1P30408 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.08■□□□□ 0.97
TM4SF1P30408 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF1P30408 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.08■□□□□ 0.97
TM4SF1P30408 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.08■□□□□ 0.97
TM4SF1P30408 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.08■□□□□ 0.96
TM4SF1P30408 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TM4SF1P30408 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.07■□□□□ 0.96
TM4SF1P30408 AC012317.2-201ENST00000623305 2251 ntBASIC21.07■□□□□ 0.96
TM4SF1P30408 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TM4SF1P30408 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TM4SF1P30408 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TM4SF1P30408 API5-211ENST00000534695 560 ntTSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 MPDU1-223ENST00000582151 728 ntBASIC21.07■□□□□ 0.96
TM4SF1P30408 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
TM4SF1P30408 AC008738.7-201ENST00000609744 511 ntBASIC21.07■□□□□ 0.96
TM4SF1P30408 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.07■□□□□ 0.96
TM4SF1P30408 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TM4SF1P30408 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.06■□□□□ 0.96
TM4SF1P30408 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.06■□□□□ 0.96
TM4SF1P30408 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TM4SF1P30408 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.06■□□□□ 0.96
TM4SF1P30408 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.06■□□□□ 0.96
TM4SF1P30408 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.06■□□□□ 0.96
TM4SF1P30408 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.06■□□□□ 0.96
TM4SF1P30408 AC131009.4-201ENST00000624048 1740 ntBASIC21.06■□□□□ 0.96
TM4SF1P30408 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TM4SF1P30408 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM4SF1P30408 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TM4SF1P30408 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TM4SF1P30408 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM4SF1P30408 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms