Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LAMA1P25391 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 AC027369.6-201ENST00000525520 931 ntBASIC16.6■□□□□ 0.25
LAMA1P25391 AC109635.5-201ENST00000533593 962 ntBASIC16.6■□□□□ 0.25
LAMA1P25391 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LAMA1P25391 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
LAMA1P25391 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.6■□□□□ 0.25
LAMA1P25391 AL161645.1-201ENST00000622716 1255 ntBASIC16.6■□□□□ 0.25
LAMA1P25391 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.6■□□□□ 0.25
LAMA1P25391 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.6■□□□□ 0.25
LAMA1P25391 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LAMA1P25391 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.59■□□□□ 0.25
LAMA1P25391 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.59■□□□□ 0.25
LAMA1P25391 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LAMA1P25391 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.59■□□□□ 0.25
LAMA1P25391 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 GIMAP3P-201ENST00000495150 836 ntBASIC16.59■□□□□ 0.25
LAMA1P25391 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
LAMA1P25391 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.59■□□□□ 0.25
LAMA1P25391 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LAMA1P25391 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LAMA1P25391 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.59■□□□□ 0.25
LAMA1P25391 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LAMA1P25391 AC009118.2-201ENST00000613275 655 ntBASIC16.59■□□□□ 0.25
LAMA1P25391 MIR6080-201ENST00000617359 66 ntBASIC16.59■□□□□ 0.25
LAMA1P25391 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LAMA1P25391 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LAMA1P25391 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LAMA1P25391 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LAMA1P25391 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LAMA1P25391 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LAMA1P25391 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LAMA1P25391 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LAMA1P25391 GPR53P-205ENST00000457298 1084 ntBASIC16.58■□□□□ 0.24
LAMA1P25391 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.58■□□□□ 0.24
LAMA1P25391 AC132938.2-201ENST00000579188 680 ntBASIC16.58■□□□□ 0.24
LAMA1P25391 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.58■□□□□ 0.24
LAMA1P25391 AL591163.1-201ENST00000641757 987 ntBASIC16.58■□□□□ 0.24
LAMA1P25391 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.58■□□□□ 0.24
LAMA1P25391 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 AC018470.1-201ENST00000624790 3129 ntBASIC16.58■□□□□ 0.24
LAMA1P25391 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.58■□□□□ 0.24
LAMA1P25391 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.58■□□□□ 0.24
LAMA1P25391 SLC22A20-204ENST00000530038 1673 ntBASIC16.58■□□□□ 0.24
LAMA1P25391 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
LAMA1P25391 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.58■□□□□ 0.24
LAMA1P25391 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 AL512384.1-201ENST00000406683 331 ntBASIC16.58■□□□□ 0.24
LAMA1P25391 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.58■□□□□ 0.24
LAMA1P25391 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LAMA1P25391 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.58■□□□□ 0.24
LAMA1P25391 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LAMA1P25391 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.58■□□□□ 0.24
LAMA1P25391 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LAMA1P25391 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LAMA1P25391 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms